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Multiple Sequence Alignments

String(Sequence(Entry(1,2,3,4,5)));



Table: Selectors for the MultiAlign structured type.
1.1 
Table: Selectors for the MultiAlign structured type.
Selector Description
Seq The list of sequences
Labels The list of labels (same order as Seq)
Align The alignment of the sequences in Seq
Tree The phylogenetic tree formed from Align.
PAS The probabilistic ancestral sequence.
AllAll The results of an ``all vs. all'' on Seq.
Title The title for the alignment.
SIA Surface/Inside/Active site prediction.
Parse A parse prediction.
Info Additional information and annotation.
Score The score of the alignment.
Max The maximum possible score (via TSP ordering).
 








Calling Sequences:
CreateMultiAlign(malign, method)
Parameters:
malign : MultiAlign
method : string

Returns: MultiAlign

Synposis:





next up previous contents
Next: Probabilistic Ancestral Sequences Up: Darwin and Problems from Biochemistry Previous: Generating Random Phylogenetic Trees
Gaston Gonnet
1998-09-15